Commits · master · Fernando / vesseg · GitLab

26 Mar, 2019 2 commits
- Merge branch 'master' of weisslab.cs.ucl.ac.uk:FernandoPerezGarcia/vesseg · b475e4d5
  Fernando Perez-Garcia authored Mar 26, 2019
  
  b475e4d5
- Sort filepaths · ecf38eb3
  Fernando Perez-Garcia authored Mar 26, 2019
  
  ecf38eb3
15 Feb, 2019 2 commits
- Merge branch 'master' of weisslab.cs.ucl.ac.uk:FernandoPerezGarcia/vesseg · 08deaba6
  Fernando Perez-Garcia authored Feb 15, 2019
  
  08deaba6
- Increase requested time · e6d270f9
  Fernando Perez-Garcia authored Feb 15, 2019
  
  e6d270f9
14 Feb, 2019 8 commits
- Reduce tensorboard data for large script · 931fc026
  Fernando Perez-Garcia authored Feb 14, 2019
  
  931fc026
- Use fewer learning rates · de447f20
  Fernando Perez-Garcia authored Feb 14, 2019
  
  de447f20
- Remove progress bar when submitting jobs · 49342aad
  Fernando Perez-Garcia authored Feb 14, 2019
  
  49342aad
- Reduce the size of the grid search · db941cb6
  Fernando Perez-Garcia authored Feb 14, 2019
  
  db941cb6
- Use different fonts depending on the host OS · 035c87a1
  Fernando Perez-Garcia authored Feb 14, 2019
  
  035c87a1
- Update new models dir · ec9b56a1
  Fernando Perez-Garcia authored Feb 14, 2019
  
  ec9b56a1
- Add jobs progress bar · 5718316b
  Fernando Perez-Garcia authored Feb 14, 2019
  
  5718316b
- Use net_run so that default app is not selected · 2ceaf73e
  Fernando Perez-Garcia authored Feb 14, 2019
  
  2ceaf73e
13 Feb, 2019 17 commits
- Fix job attribute · 2182ed2d
  Fernando Perez-Garcia authored Feb 13, 2019
  
  2182ed2d
- Fix job attribute · d5807460
  Fernando Perez-Garcia authored Feb 13, 2019
  
  d5807460
- Fix job · 35f6e53e
  Fernando Perez-Garcia authored Feb 13, 2019
  
  35f6e53e
- Try different batch sizes · bb8dea3c
  Fernando Perez-Garcia authored Feb 13, 2019
  
  bb8dea3c
- Output job path when creating it · bbb1d2fb
  Fernando Perez-Garcia authored Feb 13, 2019
  
  bbb1d2fb
- Change order of submission · ceb5b123
  Fernando Perez-Garcia authored Feb 13, 2019
  
  ceb5b123
- Fix script · a8abdb88
  Fernando Perez-Garcia authored Feb 13, 2019
  
  a8abdb88
- Add script to train many networks · d499658d
  Fernando Perez-Garcia authored Feb 13, 2019
  
  d499658d
- Modify some default parameters · 5b09c379
  Fernando Perez-Garcia authored Feb 13, 2019
  
  5b09c379
- Add application as job attribute · 6c0588a7
  Fernando Perez-Garcia authored Feb 13, 2019
  
  6c0588a7
- Add Reuben's version of seg app · 6cd76166
  Fernando Perez-Garcia authored Feb 13, 2019
  
  6cd76166
- Use default config at inference for BN · 46d12bdf
  Fernando Perez-Garcia authored Feb 13, 2019
  
  46d12bdf
- Fix job name · afc14883
  Fernando Perez-Garcia authored Feb 13, 2019
  
  afc14883
- Save job files in a new dir · 9b1721f6
  Fernando Perez-Garcia authored Feb 13, 2019
  
  9b1721f6
- Add custom spatial scaling layer · 7c3c0b2a
  Fernando Perez-Garcia authored Feb 13, 2019
  
  7c3c0b2a
- Add custom segmentation application · 20606f82
  Fernando Perez-Garcia authored Feb 13, 2019
  
  20606f82
- Use custom application to train adn infer · 762699dd
  Fernando Perez-Garcia authored Feb 13, 2019
  
  762699dd
08 Feb, 2019 4 commits
- Add script to train a net without batch normalization · 7eac2cdd
  Fernando Perez-Garcia authored Feb 08, 2019
  
  7eac2cdd
- Add HighRes3DNet without BN · 95f7da86
  Fernando Perez-Garcia authored Feb 08, 2019
  
  95f7da86
- Add loss plots to HTMLs · c7c8e0e0
  Fernando Perez-Garcia authored Feb 08, 2019
  
  c7c8e0e0
- Add seaborn to setup · cc8bf34f
  Fernando Perez-Garcia authored Feb 08, 2019
  
  cc8bf34f
07 Feb, 2019 7 commits
- Fix network name · 584ad1d1
  Fernando Perez-Garcia authored Feb 07, 2019
  
  584ad1d1
- Use same window size for inference · 634db1b4
  Fernando Perez-Garcia authored Feb 07, 2019
  
  634db1b4
- Print message when creating sampling maps and labels · c4aa2a64
  Fernando Perez-Garcia authored Feb 07, 2019
  
  c4aa2a64
- Do not run BF correction for wolm · b3039319
  Fernando Perez-Garcia authored Feb 07, 2019
```
For some reason, N4ITK gets stuck for this subject.
```
  b3039319
- Improve logging · dd468eba
  Fernando Perez-Garcia authored Feb 07, 2019
  
  dd468eba
- Add script for multimodal training with different networks · bc591fe5
  Fernando Perez-Garcia authored Feb 07, 2019
  
  bc591fe5
- Add spatial window size to config kwargs · b14174f4
  Fernando Perez-Garcia authored Feb 07, 2019
  
  b14174f4