Rename surgery-davinci to surgerydavinci

.gitlab-ci.yml

@@ -85,12 +85,12 @@ deploy docs to staging:
   stage: deploy
   script:
     # Note: the group/username directory must already exist on the server before calling this command
-    - rsync -avz -e'ssh -v' --numeric-ids --delete doc/build/html/* staging_docs_rsync:WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci 2>&1
+    - rsync -avz -e'ssh -v' --numeric-ids --delete doc/build/html/* staging_docs_rsync:WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci 2>&1
   tags:
     - docs-staging
   environment:
     name: staging
-    url: http://weisslab-lin.cs.ucl.ac.uk/staging/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci
+    url: http://weisslab-lin.cs.ucl.ac.uk/staging/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci
   only:
     - master
   dependencies:
@@ -101,7 +101,7 @@ deploy docs to production:
   stage: deploy
   script:
     # Note: the group/username directory must already exist on the server before calling this command
-    - rsync -avz -e'ssh -v' --numeric-ids --delete doc/build/html/* production_docs_rsync:WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci 2>&1
+    - rsync -avz -e'ssh -v' --numeric-ids --delete doc/build/html/* production_docs_rsync:WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci 2>&1
   tags:
     - docs-production
   environment:
@@ -120,7 +120,7 @@ deploy pip to PyPI:
     
   environment:
     name: PyPI
-    url: https://pypi.python.org/pypi/scikit-surgery-davinci
+    url: https://pypi.python.org/pypi/scikit-surgerydavinci
     
   tags:
     - pip-production

CONTRIBUTING.rst

 .. highlight:: shell
 
 ===============================================
-Contributing to scikit-surgery-davinci
+Contributing to scikit-surgerydavinci
 ===============================================
 
-We welcome contributions to scikit-surgery-davinci.
+We welcome contributions to scikit-surgerydavinci.
 
 
 Reporting bugs and feature requests
 -----------------------------------
 
-Please create a new issue on https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci/issues/new
+Please create a new issue on https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci/issues/new
 
 When reporting a bug, please include:
-* The version of scikit-surgery-davinci you are using
+* The version of scikit-surgerydavinci you are using
 * Your OS version (for example Windows 10 64-bit, macOS High Sierra, Ubuntu 16.04)
 * Detailed steps to reproduce the bug.
 
@@ -23,13 +23,13 @@ Fixing bugs or implement features
 
 The easiest way to contribute is to follow these guidelines:
 
-1. Look through the issues on https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci/issues and assign the relevant issue to yourself. If there is not an existing issue that covers your work, please create one: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci/issues/new
+1. Look through the issues on https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci/issues and assign the relevant issue to yourself. If there is not an existing issue that covers your work, please create one: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci/issues/new
 2. Read the design considerations below.
-3. Fork the repository: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci/forks/new
+3. Fork the repository: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci/forks/new
 4. Create a branch for your changes. The branch name should start with the issue number, followed by hyphen separated words describing the issue. For example: 1-update-contribution-guidelines
 5. Make your changes following the coding guidelines below.
 6. Commit and push your changes to your fork. The commit message should start with `Issue #<issue number>`, for example: "Issue #1: Fixed typo". Commit in small, related chunks. Review each commit and explain its purpose in the commit message.
-7. Submit a merge request: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci/merge_requests/new
+7. Submit a merge request: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci/merge_requests/new
 
 Design Considerations
 ---------------------

README.rst

-scikit-surgery-davinci
+scikit-surgerydavinci
 ===============================
 
-.. image:: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci/raw/master/project-icon.png
+.. image:: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci/raw/master/project-icon.png
    :height: 128px
    :width: 128px
-   :target: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci
+   :target: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci
    :alt: Logo
 
-.. image:: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci/badges/master/build.svg
-   :target: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci/pipelines
+.. image:: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci/badges/master/build.svg
+   :target: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci/pipelines
    :alt: GitLab-CI test status
 
-.. image:: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci/badges/master/coverage.svg
-    :target: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci/commits/master
+.. image:: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci/badges/master/coverage.svg
+    :target: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci/commits/master
     :alt: Test coverage
 
-.. image:: https://readthedocs.org/projects/scikit-surgery-davinci/badge/?version=latest
-    :target: http://scikit-surgery-davinci.readthedocs.io/en/latest/?badge=latest
+.. image:: https://readthedocs.org/projects/scikit-surgerydavinci/badge/?version=latest
+    :target: http://scikit-surgerydavinci.readthedocs.io/en/latest/?badge=latest
     :alt: Documentation Status
 
 
 Augmented reality for image-guided laproscopic surgery.
 
-scikit-surgery-davinci is part of the `SNAPPY`_ software project, developed at the `Wellcome EPSRC Centre for Interventional and Surgical Sciences`_, part of `University College London (UCL)`_.
+scikit-surgerydavinci is part of the `SNAPPY`_ software project, developed at the `Wellcome EPSRC Centre for Interventional and Surgical Sciences`_, part of `University College London (UCL)`_.
 
 .. figure:: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgeryardavinci/raw/master/doc/ardavin_demo.gif
 
 Author: Thomas Dowrick
 
-scikit-surgery-davinci supports Python 3.6.
+scikit-surgerydavinci supports Python 3.6.
 
 Installing
 ----------
@@ -37,7 +37,7 @@ You can install using pip:
 
 ::
 
-    pip install scikit-surgery-davinci
+    pip install scikit-surgerydavinci
 
 Example Usage
 --------------
@@ -88,7 +88,7 @@ Licensing and copyright
 -----------------------
 
 Copyright 2019 University College London.
-scikit-surgery-davinci is released under the BSD-3 license. Please see the `license file`_ for details.
+scikit-surgerydavinci is released under the BSD-3 license. Please see the `license file`_ for details.
 
 
 Acknowledgements
@@ -98,12 +98,12 @@ Supported by `Wellcome`_ and `EPSRC`_.
 
 
 .. _`Wellcome EPSRC Centre for Interventional and Surgical Sciences`: http://www.ucl.ac.uk/weiss
-.. _`source code repository`: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci
-.. _`Documentation`: https://scikit-surgery-davinci.readthedocs.io
+.. _`source code repository`: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci
+.. _`Documentation`: https://scikit-surgerydavinci.readthedocs.io
 .. _`SNAPPY`: https://weisslab.cs.ucl.ac.uk/WEISS/PlatformManagement/SNAPPY/wikis/home
 .. _`University College London (UCL)`: http://www.ucl.ac.uk/
 .. _`Wellcome`: https://wellcome.ac.uk/
 .. _`EPSRC`: https://www.epsrc.ac.uk/
-.. _`contributing guidelines`: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci/blob/master/CONTRIBUTING.rst
-.. _`license file`: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci/blob/master/LICENSE
+.. _`contributing guidelines`: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci/blob/master/CONTRIBUTING.rst
+.. _`license file`: https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci/blob/master/LICENSE
 

doc/conf.py

 #!/usr/bin/env python3
 # -*- coding: utf-8 -*-
 #
-# scikit-surgery-davinci documentation build configuration file, created by
+# scikit-surgerydavinci documentation build configuration file, created by
 # sphinx-quickstart on Tue Dec 19 17:02:44 2017.
 #
 # This file is execfile()d with the current directory set to its
@@ -106,7 +106,7 @@ modindex_common_prefix = [
 ]
 
 # General information about the project.
-project = u'scikit-surgery-davinci'
+project = u'scikit-surgerydavinci'
 copyright = u"2019, University College London"
 author = u'Thomas Dowrick'
 
@@ -200,7 +200,7 @@ html_sidebars = {
 # -- Options for HTMLHelp output ------------------------------------------
 
 # Output file base name for HTML help builder.
-htmlhelp_basename = 'scikit-surgery-davincidoc'
+htmlhelp_basename = 'scikit-surgerydavincidoc'
 
 # -- Options for LaTeX output ---------------------------------------------
 
@@ -226,8 +226,8 @@ latex_elements = {
 # (source start file, target name, title,
 #  author, documentclass [howto, manual, or own class]).
 latex_documents = [
-    ('index', 'scikit-surgery-davinci.tex',
-     u'scikit-surgery-davinci Documentation',
+    ('index', 'scikit-surgerydavinci.tex',
+     u'scikit-surgerydavinci Documentation',
      u'Thomas Dowrick', 'manual'),
 ]
 
@@ -236,8 +236,8 @@ latex_documents = [
 # One entry per manual page. List of tuples
 # (source start file, name, description, authors, manual section).
 man_pages = [
-    ('index', 'scikit-surgery-davinci',
-     u'scikit-surgery-davinci Documentation',
+    ('index', 'scikit-surgerydavinci',
+     u'scikit-surgerydavinci Documentation',
      [u'Thomas Dowrick'], 1)
 ]
 
@@ -248,10 +248,10 @@ man_pages = [
 # (source start file, target name, title, author,
 #  dir menu entry, description, category)
 texinfo_documents = [
-    ('index', 'scikit-surgery-davinci',
-     u'scikit-surgery-davinci Documentation',
+    ('index', 'scikit-surgerydavinci',
+     u'scikit-surgerydavinci Documentation',
      u'Thomas Dowrick',
-     'scikit-surgery-davinci',
+     'scikit-surgerydavinci',
      'One line description of project.',
      'Miscellaneous'),
 ]

setup.py

 # coding=utf-8
 """
-Setup for scikit-surgery-davinci
+Setup for scikit-surgerydavinci
 """
 
 from setuptools import setup, find_packages
@@ -11,13 +11,13 @@ with open('README.rst') as f:
     long_description = f.read()
 
 setup(
-    name='scikit-surgery-davinci',
+    name='scikit-surgerydavinci',
     version=versioneer.get_version(),
     cmdclass=versioneer.get_cmdclass(),
     description='Augmented Reality for Davinci Surgical Robot',
     long_description=long_description,
     long_description_content_type='text/x-rst',
-    url='https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgery-davinci',
+    url='https://weisslab.cs.ucl.ac.uk/WEISS/SoftwareRepositories/SNAPPY/scikit-surgerydavinci',
     author='Thomas Dowrick',
     author_email='YOUR-EMAIL@ucl.ac.uk',
     license='BSD-3 license',

sksurgerydavinci/__init__.py

 # coding=utf-8
-"""scikit-surgery-davinci"""
+"""scikit-surgerydavinci"""
 
 from ._version import get_versions
 __version__ = get_versions()['version']

sksurgerydavinci/__main__.py

 #!/usr/bin/python
 #  -*- coding: utf-8 -*-
-"""scikit-surgery-davinci"""
+"""scikit-surgerydavinci"""
 
 import sys
 

sksurgerydavinci/ui/__init__.py

 # coding=utf-8
 
-"""scikit-surgery-davinci"""
+"""scikit-surgerydavinci"""